Genome browser index

Choose a reference collection to explore its sequences and annotations in JBrowse.

Turnip crinkle virus

3 selectable references · 4,639 bases

Genome, satellite F and satellite C

Open TCV

Cucumber mosaic virus

4 selectable references · 8,959 bases

RNA1, RNA2, RNA3 and satellite RNA

Open CMV

Cauliflower mosaic virus

2 selectable references · 16,624 bases

Reference V00140.1 + artificial circularized V00140.2

Open CaMV

ORMV / TMV-Cg and satellite collection

3 selectable references · 13,845 bases

ORMV, TMV-Cg and satellite tobacco necrosis virus (NC_001557.1)

Open YoMV

Turnip rosette virus

1 selectable reference · 4,086 bases

Complete genome

Open TRoV

Turnip yellow mosaic virus

1 selectable reference · 6,318 bases

Complete genome

Open TYMV

Turnip mosaic virus

1 selectable reference · 9,835 bases

Complete genome, genes and R-motif tracks

Open TuMV

Arabidopsis latent virus 1

2 selectable references · 9,553 bases

RNA1 and RNA2

Open ALV1

Arabidopsis thaliana (TAIR10)

7 selectable references · 119,667,750 bases

Nuclear chromosomes 1–5, chloroplast and mitochondrion

Open TAIR

Choose a virus or Arabidopsis above. Inside each dataset, the reference dropdown selects a chromosome, viral genome segment or associated satellite. Each dataset has its own annotation tracks. The Genome menu switches datasets.